Nomenclature

Gene Symbol
LSM8 (H. sapiens)
Other Gene Symbols
, N(alpha)-acetyltransferase 38, NAA38, NatC auxiliary subunit, FLJ33242, LSM8
Full Name
LSM8 homolog, U6 small nuclear RNA associated
Other Names
LSM8, LSM8 homolog, U6 small nuclear RNA associated, MAK31-like protein, N-alpha-acetyltransferase 38, NatC auxiliary subunit, U6 snRNA-associated Sm-like protein LSm8

Other Resources

Entrez: Gene Info
51691
Uniprot: Protein Info
LSM8_HUMAN
Organism-Specific Database
BioGrid: Interaction Info
119679
PDB: Structures
SpliProt3D: Structural Model
LSM8

Gene Product Info

Molecular Weight (kD)
10.4
Domains
Motifs
Features
Complex Association
B complex, tri-snRNP
Class / Family
LSm
Notes

Orthologs

Name Organism
LSM8 S. cerevisiae
lsm8 S. pombe
CG2021 D. melanogaster
Y73B6BL.32 C. elegans
NAA38 G. gallus

View orthologs at Homologene

Interactions
(from Hegele et al, 2012)

Interacting Partner 1 Interacting Partner 2 Interaction Type Score PubMed ID
LSM8 SNRPB Y2H: Prey/Bait 1 22365833
LSM8 SNRPD1 Dervied from Literature 15231747
LSM8 LSM2 Dervied from Literature 14667819, 15231747
LSM8 LSM2 Y2H: Prey/Bait 0.5 22365833
LSM8 LSM3 Dervied from Literature 15231747
LSM8 LSM3 Y2H: Prey/Bait 0.5 22365833
LSM8 LSM4 Dervied from Literature 15231747
LSM8 LSM6 Dervied from Literature 15231747
LSM8 LSM7 Dervied from Literature 15231747
LSM8 SNRNP200 Y2H: Prey/Bait 0.75 22365833
LSM8 EFTUD2 Y2H: Prey/Bait 0.52 22365833
LSM8 SMU1 Y2H: Prey/Bait 0.64 22365833
LSM8 RBM5 Y2H: Prey/Bait 0.4 22365833

view interactions at SSPPIR...

Identified in the following experiments:

Name Species # Of Peptides PubMed ID
B complex on MINX, H. sapiens, (Agafonov et al 2011) H. sapiens 32 21536652
tri-snRNP, H. sapiens, (Agafonov et al 2011) H. sapiens 31 21536652
B complex Sample#3, on MINX-MS2 "kinetically" trapped, H. sapiens, (Boesler et al 2015) H. sapiens 23 27377154
B complex sample 2, H. sapiens, (Bessonov et al 2008) H. sapiens 18 18322460
B complex on PM5, sample 2, H. sapiens, (Schmidt et al 2014) H. sapiens 16 24448447
Pre-B complex Sample#3, on MINX-MS2 stalled by DDX23 (hPrp28) depletion, H. sapiens, (Boesler et al 2015) H. sapiens 13 27377154
Pre-B complex Sample#1, on MINX-MS2 stalled by DDX23 (hPrp28) depletion, H. sapiens, (Boesler et al 2015) H. sapiens 12 27377154
Pre-B complex Sample#2, on MINX-MS2 stalled by DDX23 (hPrp28) depletion, H. sapiens, (Boesler et al 2015) H. sapiens 11 27377154
B complex sample 1, H. sapiens, (Bessonov et al 2008) H. sapiens 10 18322460
B complex on PM5, sample 1, H. sapiens, (Schmidt et al 2014) H. sapiens 10 24448447
B complex Sample#1, on MINX-MS2 "kinetically" trapped, H. sapiens, (Boesler et al 2015) H. sapiens 10 27377154
B complex via MS2 tag, sample 2, H. sapiens, (Deckert et al 2006) H. sapiens 7 16809785
Prp8 tap-tag pulldown, S. cerevisiae, (Khanna et al 2009) S. cerevisiae 7 19789211
B complex Sample#2, on MINX-MS2 "kinetically" trapped, H. sapiens, (Boesler et al 2015) H. sapiens 7 27377154
penta-snRNP, S. cerevisiae, (Stevens et al 2002) S. cerevisiae 4 11804584
B complex on Ftz, sample 1, H. sapiens, (Herold et al 2009) H. sapiens 4 18981222
B complex via tobramycin tag, sample 2, H. sapiens, (Deckert et al 2006) H. sapiens 4 16809785
B complex sample 1, S. cerevisiae, (Fabrizio et al 2009) S. cerevisiae 3 19941820
Supraspliceosome, G. gallus, (Chen et al 2007) G. gallus 3 17537823
Bact complex on PM5-10, H. sapiens, (Bessonov et al 2010) H. sapiens 3 20980672
Mixed complexes Weri, H. sapiens, (Sharma et al 2008) H. sapiens 2 18193060
C complex sample 2, H. sapiens, (Bessonov et al 2008) H. sapiens 2 18322460
Bact complex on PM5-20, H. sapiens, (Bessonov et al 2010) H. sapiens 2 20980672
Supraspliceosome, H. sapiens, (Chen et al 2007) H. sapiens 2 17537823
B complex via tobramycin tag, sample 1, H. sapiens, (Deckert et al 2006) H. sapiens 2 16809785
Cwc21 tap-tag pulldown, S. cerevisiae, (Khanna et al 2009) S. cerevisiae 2 19789211
Bact complex, deltaPrp2 on M3Actin, Orbitrap, 0.25 pmol, S. cerevisiae, (Warkocki et al 2009) S. cerevisiae 2 19935684
C complex on PM5, sample 2, H. sapiens, (Schmidt et al 2014) H. sapiens 2 24448447
C complex exons trimmed, H. sapiens, (Ilagan et al 2009) H. sapiens 1 19761775
B complex sample 2, S. cerevisiae, (Fabrizio et al 2009) S. cerevisiae 1 19941820
B complex on Ftz, sample 2, H. sapiens, (Herold et al 2009) H. sapiens 1 18981222
C complex on MINX-GG, H. sapiens, (Bessonov et al 2010) H. sapiens 1 20980672
B complex on Zeste62, sample 2, D. melanogaster, (Herold et al 2009) D. melanogaster 1 18981222
B complex via MS2 tag, sample 1, H. sapiens, (Deckert et al 2006) H. sapiens 1 16809785
Bact complex, deltaPrp2 on M3Actin, Q-Tof, 1 pmol, S. cerevisiae, (Warkocki et al 2009) S. cerevisiae 1 19935684
tri-snRNP, S. cerevisiae, (Stevens et al 1999) S. cerevisiae 11720284
tri-snRNP, S. cerevisiae, (Gottschalk et al 1999) S. cerevisiae 10449419
Mixed spliceosome complexes, H. sapiens, (Rappsilber et al 2002) H. sapiens 12176931
C complex on PM5, sample 1, H. sapiens, (Schmidt et al 2014) H. sapiens 24448447

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