Nomenclature

Gene Symbol
DHX9 (H. sapiens)
Other Gene Symbols
DDX9, FLJ17406, LKP, NDH2, NDHII
Full Name
DEAH (Asp-Glu-Ala-His) box polypeptide 9
Other Names
DDX9, ATP-dependent RNA helicase A, DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 9, DEAH box protein 9, leukophysin, nuclear DNA helicase II

Other Resources

Entrez: Gene Info
1660
Uniprot: Protein Info
DHX9_HUMAN
Organism-Specific Database
BioGrid: Interaction Info
108025
PDB: Structures
3LLM
SpliProt3D: Structural Model
DHX9

Gene Product Info

Molecular Weight (kD)
141.0
Domains
DRBM, Helicase ATP-binding, Helicase C-terminal
Motifs
DEIH box, Nuclear localization signal
Features
Class / Family
misc. proteins found irregularly with spliceosomes
Notes

Orthologs

Name Organism
mle D. melanogaster
T07D4.3 C. elegans

View orthologs at Homologene

Interactions
(from Hegele et al, 2012)

Interacting Partner 1 Interacting Partner 2 Interaction Type Score PubMed ID
DHX9 SNRPB Dervied from Literature 11149922
DHX9 SNRPD3 Dervied from Literature 11149922
DHX9 SNRPB2 Dervied from Literature 11149922
DHX9 DHX9 Dervied from Literature 11402034, 12711669
DHX9 HNRNPK Y2H: Bait/Prey 0.5 22365833
DHX9 DDX5 Y2H: Bait/Prey 0.5 22365833
DHX9 RBM4 Y2H: Bait/Prey 0.5 22365833
DHX9 KHDRBS1 Y2H: Bait/Prey 1 22365833
DHX9 KHDRBS1 Dervied from Literature 10951562
DHX9 SMN1 Dervied from Literature 11149922

view interactions at SSPPIR...

Identified in the following experiments:

Name Species # Of Peptides PubMed ID
Pre-B complex Sample#3, on MINX-MS2 stalled by DDX23 (hPrp28) depletion, H. sapiens, (Boesler et al 2015) H. sapiens 150 27377154
B complex Sample#3, on MINX-MS2 "kinetically" trapped, H. sapiens, (Boesler et al 2015) H. sapiens 89 27377154
Pre-B complex Sample#2, on MINX-MS2 stalled by DDX23 (hPrp28) depletion, H. sapiens, (Boesler et al 2015) H. sapiens 44 27377154
Supraspliceosome, H. sapiens, (Chen et al 2007) H. sapiens 43 17537823
B complex on Ftz, sample 2, H. sapiens, (Herold et al 2009) H. sapiens 33 18981222
B complex Sample#2, on MINX-MS2 "kinetically" trapped, H. sapiens, (Boesler et al 2015) H. sapiens 27 27377154
B complex on Ftz, sample 1, H. sapiens, (Herold et al 2009) H. sapiens 24 18981222
Pre-B complex Sample#1, on MINX-MS2 stalled by DDX23 (hPrp28) depletion, H. sapiens, (Boesler et al 2015) H. sapiens 16 27377154
B complex Sample#1, on MINX-MS2 "kinetically" trapped, H. sapiens, (Boesler et al 2015) H. sapiens 15 27377154
B complex sample 2, H. sapiens, (Bessonov et al 2008) H. sapiens 14 18322460
Mixed spliceosome complexes on Ftz, H. sapiens, (Zhou et al 2002) H. sapiens 7 12226669
mRNP on short 5' exon, AdML, H. sapiens, (Merz et al 2007) H. sapiens 6 17095540
mRNP unspliced control, H. sapiens, (Merz et al 2007) H. sapiens 4 17095540
E complex IP'd by antibody to PRPF40A, H. sapiens, (Marakov et al 2011) H. sapiens 4 22110043
Supraspliceosome, G. gallus, (Chen et al 2007) G. gallus 3 17537823
mRNP on AdML, H. sapiens, (Merz et al 2007) H. sapiens 2 17095540
C complex released in 1M NaCl, H. sapiens, (Bessonov et al 2008) H. sapiens 1 18322460
Mixed spliceosome complexes on AdML, H. sapiens, (Zhou et al 2002) H. sapiens 1 12226669
P complex on AdML, short 3' exon, Velos, H. sapiens, (Ilagan et al 2013) H. sapiens 1 23345524
Mixed spliceosome complexes, H. sapiens, (Rappsilber et al 2002) H. sapiens 12176931
A complex, H. sapiens, (Hartmuth et al 2002) H. sapiens 12477934
PSF-pulldown, without splicing substrate, H. sapiens, (Peng et al 2006) H. sapiens 17114945
PSF-pulldown, with AdMl splicing subtrate, H. sapiens, (Peng et al 2006) H. sapiens 17114945

©2011 Spliceosome Component Database  All Rights Reserved.
design by juricalab