Nomenclature

Gene Symbol: Prp38 (D. melanogaster)
Other Gene Symbols: CG30342, CG8054, Dmel\CG30342, dprp38
Full Name: pre-mRNA processing factor 38
Other Names: —, CG30342 gene product from transcript CG30342-RA

Other Resources

Entrez: Gene Info: 35934
Uniprot: Protein Info: Q7JVL3_DROME
Organism-Specific Database: FBgn0050342
BioGrid: Interaction Info: 61772
PDB: Structures: —
SpliProt3D: Structural Model: —

Gene Product Info

Molecular Weight (kD): 40.1
Domains: —
Motifs: —
Features: —
Complex Association: B complex
Class / Family: Recruited at B complex
Notes: —

Orthologs

Name	Organism
PRPF38A	H. sapiens
PRP38	S. cerevisiae
prp38	S. pombe
D1054.14	C. elegans
PRPF38A	G. gallus

View orthologs at Homologene

Identified in the following experiments:

Name	Species	# Of Peptides	PubMed ID
B complex Sample#3, on MINX-MS2 "kinetically" trapped, H. sapiens, (Boesler et al 2015)	H. sapiens	83	27377154
B complex Sample#2, on MINX-MS2 "kinetically" trapped, H. sapiens, (Boesler et al 2015)	H. sapiens	40	27377154
B complex on MINX, H. sapiens, (Agafonov et al 2011)	H. sapiens	32	21536652
B complex Sample#1, on MINX-MS2 "kinetically" trapped, H. sapiens, (Boesler et al 2015)	H. sapiens	32	27377154
Bact complex on PM5-20, H. sapiens, (Bessonov et al 2010)	H. sapiens	31	20980672
B complex sample 2, H. sapiens, (Bessonov et al 2008)	H. sapiens	30	18322460
B complex on PM5, sample 2, H. sapiens, (Schmidt et al 2014)	H. sapiens	28	24448447
B complex via MS2 tag, sample 2, H. sapiens, (Deckert et al 2006)	H. sapiens	24	16809785
Bact complex on PM5-10, H. sapiens, (Bessonov et al 2010)	H. sapiens	23	20980672
B complex sample 1, S. cerevisiae, (Fabrizio et al 2009)	S. cerevisiae	21	19941820
B complex on Ftz, sample 1, D. melanogaster, (Herold et al 2009)	D. melanogaster	19	18981222
B complex sample 1, H. sapiens, (Bessonov et al 2008)	H. sapiens	17	18322460
B complex on Ftz, sample 1, H. sapiens, (Herold et al 2009)	H. sapiens	13	18981222
B complex on PM5, sample 1, H. sapiens, (Schmidt et al 2014)	H. sapiens	13	24448447
B complex on Zeste62, sample 2, D. melanogaster, (Herold et al 2009)	D. melanogaster	11	18981222
B complex via MS2 tag, sample 1, H. sapiens, (Deckert et al 2006)	H. sapiens	11	16809785
Pre-B complex Sample#1, on MINX-MS2 stalled by DDX23 (hPrp28) depletion, H. sapiens, (Boesler et al 2015)	H. sapiens	11	27377154
B complex on Ftz, sample 2, H. sapiens, (Herold et al 2009)	H. sapiens	10	18981222
Pre-B complex Sample#3, on MINX-MS2 stalled by DDX23 (hPrp28) depletion, H. sapiens, (Boesler et al 2015)	H. sapiens	10	27377154
C complex on PM5, sample 1, H. sapiens, (Schmidt et al 2014)	H. sapiens	9	24448447
Pre-B complex Sample#2, on MINX-MS2 stalled by DDX23 (hPrp28) depletion, H. sapiens, (Boesler et al 2015)	H. sapiens	9	27377154
C complex sample 2, H. sapiens, (Bessonov et al 2008)	H. sapiens	8	18322460
B complex sample 2, S. cerevisiae, (Fabrizio et al 2009)	S. cerevisiae	8	19941820
C complex on MINX-GG, H. sapiens, (Bessonov et al 2010)	H. sapiens	8	20980672
B complex on Zeste62, sample 3, D. melanogaster, (Herold et al 2009)	D. melanogaster	8	18981222
penta-snRNP, S. cerevisiae, (Stevens et al 2002)	S. cerevisiae	7	11804584
C complex on Ftz, sample 1, D. melanogaster, (Herold et al 2009)	D. melanogaster	7	18981222
B complex on Zeste62, sample 1, D. melanogaster, (Herold et al 2009)	D. melanogaster	7	18981222
B complex on Ftz, sample 2, D. melanogaster, (Herold et al 2009)	D. melanogaster	7	18981222
Bact complex, deltaPrp2 on M3Actin, Orbitrap, 0.25 pmol, S. cerevisiae, (Warkocki et al 2009)	S. cerevisiae	7	19935684
C complex released in 1M NaCl, H. sapiens, (Bessonov et al 2008)	H. sapiens	6	18322460
C complex on Ftz, sample 2, D. melanogaster, (Herold et al 2009)	D. melanogaster	6	18981222
P complex on AdML, short 3' exon, Velos, H. sapiens, (Ilagan et al 2013)	H. sapiens	6	23345524
C complex on PM5, sample 2, H. sapiens, (Schmidt et al 2014)	H. sapiens	6	24448447
Supraspliceosome, G. gallus, (Chen et al 2007)	G. gallus	5	17537823
C complex sample 1, H. sapiens, (Bessonov et al 2008)	H. sapiens	4	18322460
C complex on ActinACAC, S. cerevisiae, (Fabrizio et al 2009)	S. cerevisiae	3	19941820
C complex on PM5, H. sapiens, (Bessonov et al 2010)	H. sapiens	3	20980672
Supraspliceosome, H. sapiens, (Chen et al 2007)	H. sapiens	3	17537823
B complex via tobramycin tag, sample 1, H. sapiens, (Deckert et al 2006)	H. sapiens	3	16809785
Bact complex, deltaPrp2 on M3Actin, Q-Tof, 1 pmol, S. cerevisiae, (Warkocki et al 2009)	S. cerevisiae	3	19935684
C complex on AdML, 3'SS mut, Velos, H. sapiens, (Ilagan et al 2013)	H. sapiens	3	23345524
C complex on ActinD31, S. cerevisiae, (Fabrizio et al 2009)	S. cerevisiae	2	19941820
C complex, H. sapiens, (Jurica et al 2002)	H. sapiens	2	11991638
Bact complex sample 2, S. cerevisiae, (Fabrizio et al 2009)	S. cerevisiae	1	19941820
Bact complex sample 1, S. cerevisiae, (Fabrizio et al 2009)	S. cerevisiae	1	19941820
C complex, H. sapiens, (Ilagan et al 2009)	H. sapiens	1	19761775
tri-snRNP, S. cerevisiae, (Gottschalk et al 1999)	S. cerevisiae	■	10449419
Mixed spliceosome complexes, H. sapiens, (Rappsilber et al 2002)	H. sapiens	■	12176931
Prp1 tap-tag pulldown, S. pombe, (Carnahan et al 2005)	S. pombe	■	15755920
B complex on MINX-MS2, ATPgammaS block, 40S glycerol gradient peak, H. sapiens, (Agafonov et al 2016)	H. sapiens	■	27411562