Nomenclature

Gene Symbol
HNRNPF (H. sapiens)
Other Gene Symbols
HNRPF, MGC110997, OK/SW-cl.23, mcs94-1
Full Name
heterogeneous nuclear ribonucleoprotein F
Other Names
hnRNP F, HnRNP F protein, heterogeneous nuclear ribonucleoprotein F, nucleolin-like protein mcs94-1

Other Resources

Entrez: Gene Info
3185
Uniprot: Protein Info
HNRPF_HUMAN
Organism-Specific Database
BioGrid: Interaction Info
109426
PDB: Structures
2HGL, 2HGM, 2HGN, 2KFY, 2KG0
SpliProt3D: Structural Model
HNRNPF

Gene Product Info

Molecular Weight (kD)
45.7
Domains
RRM
Motifs
Features
Class / Family
hnRNP
Notes

Interactions
(from Hegele et al, 2012)

Interacting Partner 1 Interacting Partner 2 Interaction Type Score PubMed ID
HNRNPF SNRPC Y2H: Prey/Bait 1 22365833
HNRNPF SF3B4 Y2H: Prey/Bait 1 22365833
HNRNPF SF1 Y2H: Bidirectional 0.7 22365833
HNRNPF TXNL4A Dervied from Literature 11054566
HNRNPF RBFOX2 Y2H: Bait/Prey 0.6 22365833
HNRNPF HNRNPUL1 Y2H: Bait/Prey 0.68 22365833
HNRNPF NCBP2 Dervied from Literature 9111328
HNRNPF NCBP1 Dervied from Literature 9111328
HNRNPF HNRNPA0 Y2H: Bait/Prey 0.4 22365833
HNRNPF HNRNPD Y2H: Bait/Prey 0.4 22365833
HNRNPF HNRNPH1 Dervied from Literature 9858532
HNRNPF HNRNPH3 Y2H: Bidirectional 1 22365833
HNRNPF RBM4 Y2H: Bait/Prey 0.6 22365833
HNRNPF TOE1 Y2H: Prey/Bait 0.78 22365833

view interactions at SSPPIR...

Identified in the following experiments:

Name Species # Of Peptides PubMed ID
Supraspliceosome, H. sapiens, (Chen et al 2007) H. sapiens 12 17537823
B complex Sample#3, on MINX-MS2 "kinetically" trapped, H. sapiens, (Boesler et al 2015) H. sapiens 6 27377154
H complex, H. sapiens, (Jurica et al 2002) H. sapiens 4 11991638
Pre-B complex Sample#3, on MINX-MS2 stalled by DDX23 (hPrp28) depletion, H. sapiens, (Boesler et al 2015) H. sapiens 4 27377154
B complex Sample#1, on MINX-MS2 "kinetically" trapped, H. sapiens, (Boesler et al 2015) H. sapiens 4 27377154
C complex sample 2, H. sapiens, (Bessonov et al 2008) H. sapiens 3 18322460
C complex on MINX-GG, H. sapiens, (Bessonov et al 2010) H. sapiens 3 20980672
C complex on PM5, H. sapiens, (Bessonov et al 2010) H. sapiens 3 20980672
B complex on PM5, sample 2, H. sapiens, (Schmidt et al 2014) H. sapiens 3 24448447
C complex on PM5, sample 2, H. sapiens, (Schmidt et al 2014) H. sapiens 3 24448447
Pre-B complex Sample#1, on MINX-MS2 stalled by DDX23 (hPrp28) depletion, H. sapiens, (Boesler et al 2015) H. sapiens 3 27377154
B complex sample 2, H. sapiens, (Bessonov et al 2008) H. sapiens 2 18322460
E complex IP'd by antibody to PRPF40A, H. sapiens, (Marakov et al 2011) H. sapiens 2 22110043
Bact complex on PM5-10, H. sapiens, (Bessonov et al 2010) H. sapiens 1 20980672
C complex, H. sapiens, (Jurica et al 2002) H. sapiens 1 11991638
C complex on PM5, sample 1, H. sapiens, (Schmidt et al 2014) H. sapiens 1 24448447
Mixed spliceosome complexes, H. sapiens, (Rappsilber et al 2002) H. sapiens 12176931
PSF-pulldown, without splicing substrate, H. sapiens, (Peng et al 2006) H. sapiens 17114945
PSF-pulldown, with AdMl splicing subtrate, H. sapiens, (Peng et al 2006) H. sapiens 17114945
PSF-pulldown, without splicing substrate, 250 mM salt wash, H. sapiens, (Peng et al 2006) H. sapiens 17114945
PSF-pulldown, with AdMl splicing subtrate, 250 mM salt wash, H. sapiens, (Peng et al 2006) H. sapiens 17114945

©2011 Spliceosome Component Database  All Rights Reserved.
design by juricalab