Nomenclature

Gene Symbol: CG3542 (D. melanogaster)
Other Gene Symbols: Dmel\CG3542
Full Name: CG3542
Other Names: —, CG3542 gene product from transcript CG3542-RA

Other Resources

Entrez: Gene Info: 33513
Uniprot: Protein Info: Q7KU25_DROME
Organism-Specific Database: FBgn0031492
BioGrid: Interaction Info: 59731
PDB: Structures: —
SpliProt3D: Structural Model: —

Gene Product Info

Molecular Weight (kD): 86.7
Domains: —
Motifs: —
Features: —
Complex Association: A complex
Class / Family: Recruited at A complex
Notes: —

Orthologs

Name	Organism
PRPF40A	H. sapiens
PRP40	S. cerevisiae
usp104	S. pombe
ZK1098.1	C. elegans
PRPF40A	G. gallus

View orthologs at Homologene

Identified in the following experiments:

Name	Species	# Of Peptides	PubMed ID
B complex via tobramycin tag, sample 2, H. sapiens, (Deckert et al 2006)	H. sapiens	24	16809785
Bact complex, deltaPrp2 on M3Actin, Orbitrap, 0.25 pmol, S. cerevisiae, (Warkocki et al 2009)	S. cerevisiae	21	19935684
B complex sample 1, S. cerevisiae, (Fabrizio et al 2009)	S. cerevisiae	19	19941820
B complex via tobramycin tag, sample 1, H. sapiens, (Deckert et al 2006)	H. sapiens	17	16809785
B complex on Zeste62, sample 2, D. melanogaster, (Herold et al 2009)	D. melanogaster	13	18981222
B complex sample 2, S. cerevisiae, (Fabrizio et al 2009)	S. cerevisiae	12	19941820
B complex on Zeste62, sample 3, D. melanogaster, (Herold et al 2009)	D. melanogaster	11	18981222
A complex, H. sapiens, (Behzadnia et al 2007)	H. sapiens	10	17332742
A complex on MINX, H. sapiens, (Agafonov et al 2011)	H. sapiens	10	21536652
Mixed spliceosome complexes on AdML, H. sapiens, (Zhou et al 2002)	H. sapiens	9	12226669
Mixed spliceosome complexes on Ftz, H. sapiens, (Zhou et al 2002)	H. sapiens	9	12226669
B complex on Ftz, sample 1, D. melanogaster, (Herold et al 2009)	D. melanogaster	9	18981222
E complex IP'd by antibody to PRPF40A, H. sapiens, (Marakov et al 2011)	H. sapiens	9	22110043
E complex IP'd by antibody to U1A, H. sapiens, (Marakov et al 2011)	H. sapiens	9	22110043
Pre-B complex Sample#2, on MINX-MS2 stalled by DDX23 (hPrp28) depletion, H. sapiens, (Boesler et al 2015)	H. sapiens	9	27377154
B complex on Zeste62, sample 1, D. melanogaster, (Herold et al 2009)	D. melanogaster	8	18981222
Bact complex, deltaPrp2 on M3Actin, Q-Tof, 1 pmol, S. cerevisiae, (Warkocki et al 2009)	S. cerevisiae	8	19935684
penta-snRNP, S. cerevisiae, (Stevens et al 2002)	S. cerevisiae	7	11804584
C complex on MINX-GG, H. sapiens, (Bessonov et al 2010)	H. sapiens	7	20980672
B complex sample 2, H. sapiens, (Bessonov et al 2008)	H. sapiens	7	18322460
B complex on Ftz, sample 2, D. melanogaster, (Herold et al 2009)	D. melanogaster	6	18981222
B complex Sample#2, on MINX-MS2 "kinetically" trapped, H. sapiens, (Boesler et al 2015)	H. sapiens	6	27377154
E-like complex (E') HeLa, H. sapiens, (Sharma et al 2008)	H. sapiens	5	18193060
U2 snRNP IP'd by antibody to PRPF40A, H. sapiens, (Marakov et al 2011)	H. sapiens	5	22110043
B complex on PM5, sample 1, H. sapiens, (Schmidt et al 2014)	H. sapiens	5	24448447
Bact complex sample 2, S. cerevisiae, (Fabrizio et al 2009)	S. cerevisiae	4	19941820
E-like complex (E') Weri, H. sapiens, (Sharma et al 2008)	H. sapiens	4	18193060
Mixed complexes Weri, H. sapiens, (Sharma et al 2008)	H. sapiens	3	18193060
Supraspliceosome, G. gallus, (Chen et al 2007)	G. gallus	3	17537823
SRM300 pulldown with Srm300 antibody, H. sapiens, (McCracken et al 2005)	H. sapiens	3	16159877
Pre-B complex Sample#3, on MINX-MS2 stalled by DDX23 (hPrp28) depletion, H. sapiens, (Boesler et al 2015)	H. sapiens	3	27377154
Supraspliceosome, H. sapiens, (Chen et al 2007)	H. sapiens	2	17537823
EDC-A complex Weri, H. sapiens, (Sharma et al 2008)	H. sapiens	2	18193060
SRM160 pulldown with Srm160 antibody, H. sapiens, (McCracken et al 2005)	H. sapiens	2	16159877
B complex Sample#3, on MINX-MS2 "kinetically" trapped, H. sapiens, (Boesler et al 2015)	H. sapiens	2	27377154
Bact complex sample 1, S. cerevisiae, (Fabrizio et al 2009)	S. cerevisiae	1	19941820
C complex sample 2, H. sapiens, (Bessonov et al 2008)	H. sapiens	1	18322460
C complex on PM5, H. sapiens, (Bessonov et al 2010)	H. sapiens	1	20980672
B complex on PM5, sample 2, H. sapiens, (Schmidt et al 2014)	H. sapiens	1	24448447
U1 snRNP, S. pombe, (Newo et al 2007)	S. pombe	■	17264129
C complex on PM5, sample 1, H. sapiens, (Schmidt et al 2014)	H. sapiens	■	24448447
C complex on PM5, sample 2, H. sapiens, (Schmidt et al 2014)	H. sapiens	■	24448447