Nomenclature

Gene Symbol
DHX38 (H. sapiens)
Other Gene Symbols
DDX38, KIAA0224, PRP16, PRPF16
Full Name
DEAH (Asp-Glu-Ala-His) box polypeptide 38
Other Names
PRP16, ATP-dependent RNA helicase DHX38, DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 38, DEAH box protein 38, PRP16 homolog of S.cerevisiae, pre-mRNA splicing factor ATP-dependent RNA helicase PRP16

Other Resources

Entrez: Gene Info
9785
Uniprot: Protein Info
PRP16_HUMAN
Organism-Specific Database
—
BioGrid: Interaction Info
115129
PDB: Structures
—
SpliProt3D: Structural Model
DHX38

Gene Product Info

Molecular Weight (kD)
140.5
Domains
Helicase ATP-binding, Helicase C-terminal
Motifs
DEAH box
Features
—
Class / Family
Second step factors
Notes
—

Orthologs

Name Organism
PRP16 S. cerevisiae
prp16 S. pombe
l(1)G0007 D. melanogaster
K03H1.2 C. elegans
DHX38 G. gallus

View orthologs at Homologene

Interactions
(from Hegele et al, 2012)

Interacting Partner 1 Interacting Partner 2 Interaction Type Score PubMed ID
DHX38 U2AF1 Y2H: Bait/Prey 0.85 22365833
DHX38 MFAP1 Y2H: Prey/Bait 0.5 22365833
DHX38 DHX16 Pull-down — 22365833
DHX38 DHX16 Y2H: Bidirectional 1 22365833
DHX38 GPKOW Y2H: Prey/Bait 1 22365833
DHX38 GPKOW Pull-down — 22365833
DHX38 RBM10 Pull-down — 22365833
DHX38 RBM10 Y2H: Prey/Bait 1 22365833

view interactions at SSPPIR...

Identified in the following experiments:

Name Species # Of Peptides PubMed ID
delta prp16 blocked spliceosome, S. cerevisiae, (Lardelli et al 2010) S. cerevisiae 74 20089683
C complex on MINX-GG, H. sapiens, (Bessonov et al 2010) H. sapiens 26 20980672
C complex, H. sapiens, (Jurica et al 2002) H. sapiens 9 11991638
C complex on PM5, H. sapiens, (Bessonov et al 2010) H. sapiens 7 20980672
C complex released in 1M NaCl, H. sapiens, (Bessonov et al 2008) H. sapiens 6 18322460
C complex sample 2, H. sapiens, (Bessonov et al 2008) H. sapiens 5 18322460
Mixed spliceosome complexes on AdML, H. sapiens, (Zhou et al 2002) H. sapiens 5 12226669
C complex on PM5, sample 2, H. sapiens, (Schmidt et al 2014) H. sapiens 5 24448447
C complex, H. sapiens, (Ilagan et al 2009) H. sapiens 3 19761775
C complex exons trimmed, H. sapiens, (Ilagan et al 2009) H. sapiens 2 19761775
Mixed spliceosome complexes on Ftz, H. sapiens, (Zhou et al 2002) H. sapiens 2 12226669
C complex 1M NaCl-washed core, H. sapiens, (Bessonov et al 2008) H. sapiens 1 18322460
C complex on ActinACAC, S. cerevisiae, (Fabrizio et al 2009) S. cerevisiae 1 19941820
C complex sample 1, H. sapiens, (Bessonov et al 2008) H. sapiens 1 18322460
Bact complex on PM5-20, H. sapiens, (Bessonov et al 2010) H. sapiens 1 20980672
C complex on AdML, 3'SS mut, Velos, H. sapiens, (Ilagan et al 2013) H. sapiens 1 23345524
B complex on PM5, sample 2, H. sapiens, (Schmidt et al 2014) H. sapiens 1 24448447
C complex on PM5, sample 1, H. sapiens, (Schmidt et al 2014) H. sapiens 1 24448447
Mixed spliceosome complexes, H. sapiens, (Rappsilber et al 2002) H. sapiens ■ 12176931

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