Nomenclature

Gene Symbol
LSM8 (H. sapiens)
Other Gene Symbols
, N(alpha)-acetyltransferase 38, NAA38, NatC auxiliary subunit, FLJ33242, LSM8
Full Name
LSM8 homolog, U6 small nuclear RNA associated
Other Names
LSM8, LSM8 homolog, U6 small nuclear RNA associated, MAK31-like protein, N-alpha-acetyltransferase 38, NatC auxiliary subunit, U6 snRNA-associated Sm-like protein LSm8

Other Resources

Entrez: Gene Info
51691
Uniprot: Protein Info
LSM8_HUMAN
Organism-Specific Database
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BioGrid: Interaction Info
119679
PDB: Structures
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SpliProt3D: Structural Model
LSM8

Gene Product Info

Molecular Weight (kD)
10.4
Domains
—
Motifs
—
Features
—
Complex Association
B complex, tri-snRNP
Class / Family
LSm
Notes
—

Orthologs

Name Organism
LSM8 S. cerevisiae
lsm8 S. pombe
CG2021 D. melanogaster
Y73B6BL.32 C. elegans
NAA38 G. gallus

View orthologs at Homologene

Interactions
(from Hegele et al, 2012)

Interacting Partner 1 Interacting Partner 2 Interaction Type Score PubMed ID
LSM8 SNRPB Y2H: Prey/Bait 1 22365833
LSM8 SNRPD1 Dervied from Literature — 15231747
LSM8 LSM2 Dervied from Literature — 14667819, 15231747
LSM8 LSM2 Y2H: Prey/Bait 0.5 22365833
LSM8 LSM3 Dervied from Literature — 15231747
LSM8 LSM3 Y2H: Prey/Bait 0.5 22365833
LSM8 LSM4 Dervied from Literature — 15231747
LSM8 LSM6 Dervied from Literature — 15231747
LSM8 LSM7 Dervied from Literature — 15231747
LSM8 SNRNP200 Y2H: Prey/Bait 0.75 22365833
LSM8 EFTUD2 Y2H: Prey/Bait 0.52 22365833
LSM8 SMU1 Y2H: Prey/Bait 0.64 22365833
LSM8 RBM5 Y2H: Prey/Bait 0.4 22365833

view interactions at SSPPIR...

Identified in the following experiments:

Name Species # Of Peptides PubMed ID
B complex on MINX, H. sapiens, (Agafonov et al 2011) H. sapiens 32 21536652
tri-snRNP, H. sapiens, (Agafonov et al 2011) H. sapiens 31 21536652
B complex Sample#3, on MINX-MS2 "kinetically" trapped, H. sapiens, (Boesler et al 2015) H. sapiens 23 27377154
B complex sample 2, H. sapiens, (Bessonov et al 2008) H. sapiens 18 18322460
B complex on PM5, sample 2, H. sapiens, (Schmidt et al 2014) H. sapiens 16 24448447
Pre-B complex Sample#3, on MINX-MS2 stalled by DDX23 (hPrp28) depletion, H. sapiens, (Boesler et al 2015) H. sapiens 13 27377154
Pre-B complex Sample#1, on MINX-MS2 stalled by DDX23 (hPrp28) depletion, H. sapiens, (Boesler et al 2015) H. sapiens 12 27377154
Pre-B complex Sample#2, on MINX-MS2 stalled by DDX23 (hPrp28) depletion, H. sapiens, (Boesler et al 2015) H. sapiens 11 27377154
B complex sample 1, H. sapiens, (Bessonov et al 2008) H. sapiens 10 18322460
B complex on PM5, sample 1, H. sapiens, (Schmidt et al 2014) H. sapiens 10 24448447
B complex Sample#1, on MINX-MS2 "kinetically" trapped, H. sapiens, (Boesler et al 2015) H. sapiens 10 27377154
B complex via MS2 tag, sample 2, H. sapiens, (Deckert et al 2006) H. sapiens 7 16809785
Prp8 tap-tag pulldown, S. cerevisiae, (Khanna et al 2009) S. cerevisiae 7 19789211
B complex Sample#2, on MINX-MS2 "kinetically" trapped, H. sapiens, (Boesler et al 2015) H. sapiens 7 27377154
penta-snRNP, S. cerevisiae, (Stevens et al 2002) S. cerevisiae 4 11804584
B complex on Ftz, sample 1, H. sapiens, (Herold et al 2009) H. sapiens 4 18981222
B complex via tobramycin tag, sample 2, H. sapiens, (Deckert et al 2006) H. sapiens 4 16809785
B complex sample 1, S. cerevisiae, (Fabrizio et al 2009) S. cerevisiae 3 19941820
Supraspliceosome, G. gallus, (Chen et al 2007) G. gallus 3 17537823
Bact complex on PM5-10, H. sapiens, (Bessonov et al 2010) H. sapiens 3 20980672
Mixed complexes Weri, H. sapiens, (Sharma et al 2008) H. sapiens 2 18193060
C complex sample 2, H. sapiens, (Bessonov et al 2008) H. sapiens 2 18322460
Bact complex on PM5-20, H. sapiens, (Bessonov et al 2010) H. sapiens 2 20980672
Supraspliceosome, H. sapiens, (Chen et al 2007) H. sapiens 2 17537823
B complex via tobramycin tag, sample 1, H. sapiens, (Deckert et al 2006) H. sapiens 2 16809785
Cwc21 tap-tag pulldown, S. cerevisiae, (Khanna et al 2009) S. cerevisiae 2 19789211
Bact complex, deltaPrp2 on M3Actin, Orbitrap, 0.25 pmol, S. cerevisiae, (Warkocki et al 2009) S. cerevisiae 2 19935684
C complex on PM5, sample 2, H. sapiens, (Schmidt et al 2014) H. sapiens 2 24448447
C complex exons trimmed, H. sapiens, (Ilagan et al 2009) H. sapiens 1 19761775
B complex sample 2, S. cerevisiae, (Fabrizio et al 2009) S. cerevisiae 1 19941820
B complex on Ftz, sample 2, H. sapiens, (Herold et al 2009) H. sapiens 1 18981222
C complex on MINX-GG, H. sapiens, (Bessonov et al 2010) H. sapiens 1 20980672
B complex on Zeste62, sample 2, D. melanogaster, (Herold et al 2009) D. melanogaster 1 18981222
B complex via MS2 tag, sample 1, H. sapiens, (Deckert et al 2006) H. sapiens 1 16809785
Bact complex, deltaPrp2 on M3Actin, Q-Tof, 1 pmol, S. cerevisiae, (Warkocki et al 2009) S. cerevisiae 1 19935684
tri-snRNP, S. cerevisiae, (Stevens et al 1999) S. cerevisiae ■ 11720284
tri-snRNP, S. cerevisiae, (Gottschalk et al 1999) S. cerevisiae ■ 10449419
Mixed spliceosome complexes, H. sapiens, (Rappsilber et al 2002) H. sapiens ■ 12176931
C complex on PM5, sample 1, H. sapiens, (Schmidt et al 2014) H. sapiens ■ 24448447

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