C complex sample 1, H. sapiens, (Bessonov et al 2008)

Name Species Class / Family Also Known As MW # Of Peptides
SNRNP200 H. sapiens U5 snRNP ASCC3L1, BRR2, FLJ11521, HELIC2, RP33 244.5 334
PRPF8 H. sapiens U5 snRNP HPRP8, PRP8, PRPC8, RP13 273.6 299
EFTUD2 H. sapiens U5 snRNP DKFZp686E24196, FLJ44695, KIAA0031, MFDM, Snrp116 109.4 212
AQR H. sapiens PRP19 related DKFZp686B23123, IBP160, KIAA0560, fSAP164 171.3 203
PRPF19 H. sapiens PRP19 complex NMP200, PRP19, PSO4, SNEV, UBOX4 55.2 167
XAB2 H. sapiens PRP19 related DKFZp762C1015, HCNP, HCRN, NTC90, SYF1 100.0 151
CRNKL1 H. sapiens PRP19 related CLF, CRN, Clf1, HCRN, MSTP021 100.5 143
DHX8 H. sapiens Second step factors DDX8, HRH1, PRP22, PRPF22 139.3 129
CDC5L H. sapiens PRP19 complex CDC5, CDC5-LIKE, CEF1, KIAA0432, PCDC5RP 92.3 118
CDC40 H. sapiens Second step factors EHB3, FLJ10564, MGC102802, PRP17, PRPF17 65.5 73
DDX41 H. sapiens Recruited at C complex ABS, MGC8828 69.8 71
CWC22 H. sapiens Recruited at Bact complex EIF4GL, KIAA1604, NCM, fSAPb 105.5 67
SNW1 H. sapiens PRP19 related Bx42, MGC119379, NCOA-62, PRPF45, Prp45 61.5 66
PLRG1 H. sapiens PRP19 complex Cwc1, MGC110980, PRL1, PRP46, PRPF46 57.2 63
EIF4A3 H. sapiens EJC/mRNP DDX48, DKFZp686O16189, KIAA0111, MGC10862, NMP265 46.9 61
RBM22 H. sapiens PRP19 related Cwc2, FLJ10290, ZC3H16, fSAP47 46.9 54
HNRNPC H. sapiens hnRNP C1, C2, HNRNP, HNRPC, MGC104306 33.7 51
NCBP1 H. sapiens pre-mRNA/mRNA binding proteins CBP80, MGC2087, NCBP, Sto1 91.8 46
SRSF10 H. sapiens SR protein DKFZp686H0644, FLJ30749, FLJ43846, FUSIP1, FUSIP2 31.3 40
SRSF7 H. sapiens SR protein 9G8, AAG3, SFRS7 27.4 39
SNRPA1 H. sapiens 17S U2 snRNP Lea1 28.4 39
CACTIN H. sapiens Recruited at C complex C19orf29, FLJ17482, FLJ59622, NY-REN-24, fSAPc 88.7 37
DHX16 H. sapiens Recruited at Bact complex DBP2, DDX16, PRO2014, PRP8, PRPF2 119.3 35
TRA2B H. sapiens SR protein DKFZp686F18120, Htra2-beta, SFRS10, SRFS10, TRA2-BETA 33.7 34
SRSF9 H. sapiens SR protein SFRS9, SRp30c 25.5 34
BCAS2 H. sapiens PRP19 complex DAM1, SPF27, Snt309 26.1 34
SRRM2 H. sapiens SR related 300-KD, CWF21, Cwc21, DKFZp667L0421, DKFZp686O15166 299.6 33
GPKOW H. sapiens Recruited at Bact complex GPATC5, GPATCH5, Spp2, T54 52.2 33
SRSF1 H. sapiens SR protein ASF, FLJ53078, MGC5228, SF2, SF2p33 27.7 32
SLU7 H. sapiens Second step factors 9G8, MGC9280, hSlu7 68.4 31
SNRPD2 H. sapiens Sm SMD2, SNRPD1, Sm-D2 13.5 30
YBX1 H. sapiens pre-mRNA/mRNA binding proteins BP-8, CSDA2, CSDB, DBPB, MDR-NF1 35.9 30
SNRNP40 H. sapiens U5 snRNP 40K, FLJ41108, HPRP8BP, MGC1910, PRP8BP 39.3 29
RBMX H. sapiens hnRNP HNRPG, RBMXP1, RBMXRT, RNMX, hnRNP-G 42.3 29
SYF2 H. sapiens Recruited at C complex CBPIN, DKFZp564O2082, NTC31, P29, fSAP29 28.7 28
SNRPD3 H. sapiens Sm SMD3, Sm-D3 13.9 26
SRSF6 H. sapiens SR protein B52, FLJ08061, MGC5045, SFRS6, SRP55 39.6 26
SNRPB H. sapiens Sm COD, SNRPB1, Sm-B/B', SmB/B', SmB/SmB' 24.6 26
SF3B3 H. sapiens 17S U2 snRNP KIAA0017, RSE1, SAP130, SF3b130, STAF130 135.6 26
PPWD1 H. sapiens Recruited at C complex FLJ33156, FLJ36356, KIAA0073 73.6 24
BUD31 H. sapiens PRP19 related Cwc14, EDG-2, EDG2, G10, MGC111202 17.0 24
SF3B1 H. sapiens 17S U2 snRNP Hsh155, MDS, PRP10, PRPF10, SAP155 145.8 22
PPIG H. sapiens Recruited at C complex CARS-Cyp, CYP, MGC133241, SCAF10, SRCyp 88.6 22
ELAVL1 H. sapiens alternative splicing factor ELAV1, HUR, Hua, MelG 36.1 21
PPIE H. sapiens PRP19 related CYP-33, CYP33, MGC111222, MGC3736 33.4 20
FRA10AC1 H. sapiens Recruited at C complex C10orf4, F26C11.1-like, FRA10A 37.5 20
PPIL1 H. sapiens PRP19 related CGI-124, CYPL1, MGC678, PPIase, hCyPX 18.2 19
WDR83 H. sapiens Recruited at C complex MGC4238, MORG1 34.3 19
SDE2 H. sapiens Recruited at C complex c1orf55, FLJ35382, RP4-671D7.1, dJ671D7.1 49.7 18
NOSIP H. sapiens Recruited at C complex CGI-25 33.2 18
CXorf56 H. sapiens Recruited at C complex FLJ22965 25.6 17
PCBP1 H. sapiens hnRNP HNRPE1, HNRPX, hnRNP-E1, hnRNP-X 37.5 17
SF3B2 H. sapiens 17S U2 snRNP Cus1, SAP145, SF3B145, SF3b1, SF3b150 100.2 16
CWC15 H. sapiens PRP19 complex C11orf5, Cwf15, HSPC148, ORF5, AD-002 26.6 16
FRG1 H. sapiens Occasionally detected in Bact complex FRG1A, FSG1 29.2 16
PRPF6 H. sapiens U5 snRNP ANT-1, ANT1, C20orf14, Prp6, TOM 106.9 15
NCBP2 H. sapiens pre-mRNA/mRNA binding proteins CBC2, CBP20, NIP1, PIG55 18.0 15
BUD13 H. sapiens RES complex Cwc26, FLJ27090, MGC13125, fSAP71 70.5 14
GPATCH1 H. sapiens Recruited at Bact complex ECGP, FLJ10206, FLJ34516, FLJ38686, GPATC1 103.3 14
RALY H. sapiens hnRNP HNRPCL2, MGC117312, P542 32.5 14
THOC2 H. sapiens TREX CXorf3, THO2, dJ506G2.1, hTREX120 182.8 14
FAM50A H. sapiens Recruited at C complex 9F, DXS9928E, HXC-26, HXC26, XAP5 40.2 13
SNRPB2 H. sapiens 17S U2 snRNP MGC24807, MGC45309, Msl1 25.5 13
RBMX2 H. sapiens RES complex CGI-79 37.3 13
THOC6 H. sapiens TREX MGC2655, WDR58, fSAP35 37.5 13
DDX23 H. sapiens U5 snRNP MGC8416, PRPF28, U5-100K, U5-100KD, prp28 95.6 11
DHX35 H. sapiens Recruited at C complex C20orf15, DDX35, FLJ22759, KAIA0875 78.9 11
ACIN1 H. sapiens EJC/mRNP ACINUS, ACN, DKFZp667N107, KIAA0670, fSAP152 151.9 11
HNRNPM H. sapiens hnRNP CEAR, DKFZp547H118, HNRNPM4, HNRPM, HNRPM4 77.5 11
SF3A1 H. sapiens 17S U2 snRNP PRP21, PRPF21, SAP114, SF3A120 88.9 11
PPIL3 H. sapiens Recruited at C complex CYPJ 18.2 11
C9orf78 H. sapiens Recruited at C complex HCA59, HSPC220, bA409K20.3 33.7 11
FAM32A H. sapiens Recruited at C complex OTAG12 13.2 11
BAG2 H. sapiens BAG-2, KIAA0576, MGC149462, dJ417I1.2 23.8 11
NFKBIL1 H. sapiens IKBL, LST1, NFKBIL 43.2 10
SNRPE H. sapiens Sm B-raf, SME, Sm-E 10.8 10
SNRPD1 H. sapiens Sm HsT2456, SMD1, SNRPD, Sm-D1 13.3 10
PRPF4 H. sapiens U4/U6 snRNP HPRP4, HPRP4P, PRP4, Prp4p 58.4 10
SNIP1 H. sapiens RES complex FLJ12553, PMRED 45.8 10
DDX39B H. sapiens other rna binding domain containing BAT1, D6S81E, UAP56 49.0 10
ZNF830 H. sapiens Recruited at Bact complex CCDC16, MGC20398, OMCG1, SEL13 42.0 10
CCDC12 H. sapiens Recruited at Bact complex FLJ39430, FLJ40801, MGC23918 19.2 10
SRRT H. sapiens pre-mRNA/mRNA binding proteins ARS2, ASR2, MGC126427, serrate 100.7 9
THOC1 H. sapiens TREX HPR1, P84, P84N5 75.7 9
PNN H. sapiens EJC/mRNP DRS, DRSP, SDK3, memA 81.6 9
HNRNPH2 H. sapiens hnRNP FTP3, HNRPH', HNRPH2, hnRNPH' 49.3 8
FAM50B H. sapiens Occasionally detected in C complex D6S2654E, X5L 38.7 8
PHF5A H. sapiens 17S U2 snRNP INI, MGC1346, Rds3, SAP14b, SF3b14b 12.4 8
CSDA H. sapiens CSDA1, DBPA, ZONAB 40.1 7
THOC3 H. sapiens TREX MGC5469, TEX1 38.8 7
DHX15 H. sapiens 17S U2 snRNP associated DBP1, DDX15, HRH2, PRP43, PRPF43 90.9 7
USP39 H. sapiens tri-snRNP 65K, CGI-21, FLJ33136, HSPC332, MGC75069 65.4 7
HSPA8 H. sapiens PRP19 complex HSC54, HSC70, HSC71, HSP71, HSP73 70.9 7
PPIL2 H. sapiens Recruited at Bact complex CYC4, CYP60, Cyp-60, FLJ39930, MGC33174 58.8 7
NKAP H. sapiens Occasionally detected in C complex FLJ22626 47.1 7
TFIP11 H. sapiens Recruited at B complex FLJ22086, NTR1, Spp382, TIP39, bK445C9.6 96.8 7
SF3A3 H. sapiens 17S U2 snRNP PRP9, PRPF9, SAP61, SF3a60 58.8 7
RBM8A H. sapiens EJC/mRNP BOV-1A, BOV-1B, BOV-1C, C1DELq21.1, DEL1q21.1 19.9 7
SF3B6 H. sapiens 17S U2 snRNP SF3B14, CGI-110, HSPC175, Ht006, P14, SAP14 14.6 7
RNF113A H. sapiens Recruited at Bact complex Cwc24, RNF113, ZNF183 38.8 7
SAFB2 H. sapiens KIAA0138 107.5 6
TRA2A H. sapiens SR protein AWMS1, HSU53209 32.7 6
CTNNBL1 H. sapiens PRP19 complex C20orf33, FLJ21108, NAP, NYD-SP19, P14L 65.2 6
PPIH H. sapiens U4/U6 snRNP CYP-20, CYPH, MGC5016, SnuCyp-20, USA-CYP 19.2 6
YJU2B H. sapiens Occasionally detected in C complex coiled-coil domain containing 130, CCDC130,MGC10471 44.8 6
ALYREF H. sapiens EJC/mRNP ALY, ALY/REF, BEF, REF, THOC4 26.9 6
PRPF18 H. sapiens Second step factors FLJ10210, PRP18, hPrp18 39.9 6
RBM7 H. sapiens pre-mRNA/mRNA binding proteins FLJ11153 30.5 6
THOC7 H. sapiens TREX FLJ23445, NIF3L1BP1, fSAP24 23.7 5
GNL3 H. sapiens C77032, E2IG3, MGC800, NNP47, NS 62.0 5
GNB2L1 H. sapiens Occasionally detected in C complex Gnb2-rs1, H12.3, HLC-7, PIG21, RACK1 35.1 5
SMU1 H. sapiens Recruited at B complex BWD, DKFZp761L0916, FLJ10805, FLJ10870, FLJ11970 57.5 5
THOC5 H. sapiens TREX C22orf19, Fmip, PK1.3, fSAP79 78.5 5
DGCR14 H. sapiens Recruited at C complex DGCR13, DGS-H, DGS-I, DGSH, DGSI 52.6 5
ZC3H18 H. sapiens other rna binding domain containing FLJ22664, FLJ34530, FLJ36075, NHN1 106.4 5
SNRPG H. sapiens Sm MGC117317, SMG, Sm-G 8.5 5
ANXA1 H. sapiens ANX1, LPC1 38.7 4
GCFC1 H. sapiens pre-mRNA/mRNA binding proteins BM020, C21orf66, FLJ90561, FSAP105, GCFC 104.8 4
SNRPF H. sapiens Sm SMF, Sm-F, snRNP-F 9.7 4
ZCCHC10 H. sapiens Occasionally detected in C complex FLJ20094 21.0 4
PRPF38A H. sapiens Recruited at B complex FLJ14936, MGC3320, Prp38, RP5-965L7.1 37.5 4
SRSF3 H. sapiens SR protein SFRS3, SRp20 19.3 4
C17orf85 H. sapiens ELG, FLJ32162, HSA277841 70.6 4
SRRM1 H. sapiens SR related 160-KD, MGC39488, POP101, SRM160 102.3 4
ZCRB1 H. sapiens other rna binding domain containing MADP-1, MADP1, MGC26805, RBM36, SNRNP31 24.6 3
SRSF5 H. sapiens SR protein HRS, SFRS5, SRP40 31.3 3
ISY1 H. sapiens PRP19 related FSAP33, KIAA1160 33.0 3
SKIV2L2 H. sapiens misc. proteins found irregularly with spliceosomes Dob1, KIAA0052, MGC142069, Mtr4, fSAP118 117.8 3
PRPF3 H. sapiens U4/U6 snRNP HPRP3, HPRP3P, PRP3, Prp3p, RP18 77.5 3
RBM39 H. sapiens pre-mRNA/mRNA binding proteins CAPER, CAPERalpha, DKFZp781C0423, FLJ44170, FSAP59 59.4 3
PCBP2 H. sapiens hnRNP HNRPE2, MGC110998, hnRNP-E2 38.6 3
PABPN1 H. sapiens pre-mRNA/mRNA binding proteins OPMD, PAB2, PABII, PABP-2, PABP2 32.7 3
YTHDC1 H. sapiens KIAA1966, YT521, YT521-B 84.7 2
INTS5 H. sapiens integrator complex INT5, KIAA1698 108.0 2
GPATCH3 H. sapiens other rna binding domain containing DKFZp686E0221, FLJ12455, GPATC3 59.3 2
HNRNPA0 H. sapiens hnRNP HNRPA0 30.8 2
JUP H. sapiens Occasionally detected in C complex ARVD12, CTNNG, DP3, DPIII, PDGB 81.7 2
MFAP1 H. sapiens Recruited at B complex — 52.0 2
SRSF2 H. sapiens SR protein PR264, SC-35, SC35, SFRS2, SFRS2A 25.5 2
SAP18 H. sapiens EJC/mRNP 2HOR0202, MGC27131, SAP18P 17.6 2
TOE1 H. sapiens Occasionally detected in C complex FLJ13949 56.5 2
HSPB1 H. sapiens chaperonin/heat shock CMT2F, DKFZp586P1322, HMN2B, HS.76067, HSP27 22.8 1
HNRNPA1 H. sapiens hnRNP HNRPA1, HNRPA1L3, MGC102835, hnRNP A1, hnRNP-A1 38.7 1
SF3B4 H. sapiens 17S U2 snRNP AFD1, Hsh49, MGC10828, SAP49, SF3b49 44.4 1
NRIP2 H. sapiens misc. proteins found irregularly with spliceosomes DKFZp761G1913 31.3 1
ZCCHC8 H. sapiens other rna binding domain containing DKFZp434E2220 78.6 1
C19orf53 H. sapiens HSPC023, LYDG10 10.6 1
TFE3 H. sapiens RCCP2, RCCX1, TFEA, bHLHe33 61.5 1
FBL H. sapiens FIB, FLRN, RNU3IP1 33.8 1
THRAP3 H. sapiens Recruited at A complex FLJ22082, MGC133082, MGC133083, TRAP150 108.7 1
RNPS1 H. sapiens EJC/mRNP E5.1, MGC117332 34.2 1
RUVBL1 H. sapiens misc. proteins found irregularly with spliceosomes ECP54, INO80H, NMP238, PONTIN, Pontin52 50.2 1
PABPC1 H. sapiens pre-mRNA/mRNA binding proteins PAB1, PABP, PABP1, PABPC2, PABPL1 70.7 1
SRSF4 H. sapiens SR protein SFRS4, SRP75 56.7 1
DHX38 H. sapiens Second step factors DDX38, KIAA0224, PRP16, PRPF16 140.5 1

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